8.8. pyafv.calibrate

Subpackage for calibrating the detachment forces against the deformable polygon (DP) model.

Core functions

auto_calibrate(phys[, ext_forces, dt, ...])

Auto-calibrate the parameters phys against the deformable polygon (DP) model.

Classes

DeformablePolygonSimulator(phys[, num_vertices])

Simulator for the deformable polygon (DP) model of cell doublets.

Tool functions

polygon_centroid(pts)

Centroid (center of mass) of a simple polygon with uniform density.

polygon_area_perimeter(pts)

Compute the area and perimeter for a Counter-ClockWise (CCW) polygon.

resample_polyline(pts[, M])

Resample an open polyline to M points with uniform arclength spacing.